Open Access News

News from the open access movement


Thursday, August 21, 2008

What open science can learn from the Protein Data Bank

Cameron Neylon, Re-inventing the wheel (again) - what the open science movement can learn from the history of the PDB, Science in the open, August 17, 2008.
... One of the long term champions of data availability is Professor Helen Berman, the head of the Protein Data Bank (the international repository for biomacromolecular structures) ...

I have written before about how the world might look if the PDB and other biological databases had never existed, but as I said then I didn’t know much of the real history. One of the things I hadn’t realised was how long it was after the PDB was founded before deposition of structures became expected for all atomic resolution biomacromolecular structures. ...

Helen made the point strongly that it had taken 37 years to get the PDB to where it is today; a gold standard international and publically available repository of a specific form of research data supported by a strong set of community accepted, and enforced, rules and conventions. We don’t want to take another 37 years to achieve the widespread adoption of high standards in data availability and open practice in research more generally. So it is imperative that we learn the lessons and benefit from the experience of those who built up the existing repositories. ...